PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00027404-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bHLH
Protein Properties Length: 90aa    MW: 10187.6 Da    PI: 9.3981
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00027404-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.56.4e-1017571454
                        HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                        d+iN+  ++L++llP+ +   +s K+s a +L+++++YI+sL
  WALNUT_00027404-RA 17 DQINDLVSKLQQLLPEiR-DRRSDKVSAANVLQETCNYIRSL 57
                        79**************76.99*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.115357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.24E-101776IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.0E-71757IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-91772IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MKRSRTRQPG CSRISDDQIN DLVSKLQQLL PEIRDRRSDK VSAANVLQET CNYIRSLHKE  60
VDGLSERLSE LLASTDTAQA AIIRSLLVHK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007210171.11e-41hypothetical protein PRUPE_ppa018631mg
SwissprotQ9CA642e-37PRE3_ARATH; Transcription factor PRE3
TrEMBLM5WX431e-41M5WX43_PRUPE; Uncharacterized protein
STRINGGLYMA04G34080.11e-40(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56734143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.11e-38activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1